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There are some new shapes on the streets of Vancouver. Genomic sequence decoded from patients are shown as a puzzle — can you solve the mystery of the cell?
I've encoded DNA in other ways — on public wayfinding signs.
City Trees

The trees along this city street,
Save for the traffic and the trains,
Would make a sound as thin and sweet
As trees in country lanes.

And people standing in their shade
Out of a shower, undoubtedly
Would hear such music as is made
Upon a country tree.

Oh, little leaves that are so dumb
Against the shrieking city air,
I watch you when the wind has come,—
I know what sound is there.

— Edna St. Vincent Millay

data visualization + art

Nature Biotechnology Cover

11 April 2022, Issue 40, Volume 4

1 · From sketch to cover

During the design process, there's usually an early sketch phase — you try out various ideas and see which one sticks. For this design, I was lucky to skip this step entirely — I knew exactly what I wanted to do. It was just a matter of translating the vague vision in my head onto the page.

First thing I did was to assign each top-level cluster a number. I knew that eventually I wanted to be able to know what went where.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Numbering the clusters.

Next, I had to figure out a way to arrange the clusters on the branches of a tree in a way that would (a) fill the page, (b) have smaller clusters at tips of branches, and (c) minimize or eliminate overlap.

1.1 · The tree takes shape

But I had to draw the tree first. Below are a couple of sketches. Branches are positioned to have the tree wrap around the title of the journal.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Early take on the tree and cluster position. Placement was made with the cover layout in mind. I wanted the tree to wrap around the journal title and reach into the top right of the image.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
This version fills in the empty space on the bottom left (clusters 21 and 22) and right (clusters 1 and 2) of the tree.

Once the clusters were placed in the tree, more adjustments needed to be made. Moving the clusters around so that everything looked “just so” took quite a bit of time.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
First round of placing the clusters on the tree. It wasn't great but it wasn't terrible.

1.2 · Nudge, nudge

The week of nudge.

I probably spent half a week 3 days moving the clusters around on the page.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
First round of placing the clusters on the tree. It wasn't great but it wasn't terrible.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
More nudging.

1.3 · Branches

By this point, I was pretty happy with the layout, but the branches seemed a bit sparse and much much too straight.

So, I had to get quite friendly with Illustrator's width tool, adding bends to the branches and variation to their width.

I also experimented with another color scheme that felt more summery.

You'll also notice that the boundaries of the clusters are no longer round — a littee smooth roughening grows a long way.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Little branches, I know what sound is there.

1.4 · Cover candidates

I created to sets of images. One had a black branch and wound up having a nighttime feeling — the clusters looking like lanterns.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Cover designs — dark scheme.

And the other set having a light and airy (and almost underwater) feeling with white branches. I particularly like the light outlines around the clusters

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Cover designs — light scheme.

These 8 candidates were submitted to the journal.

The editor selected the bottom left option from the light series.

1.5 · Elements of the final cover

A few final tweaks to the editor's selection saw a little more branch detail and contrast.

Below, I walk you through all the elements of the final cover image.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
I normally don't use gradients but I guess I was feeling like someone else.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
The outer boundaries of the clusters form a single shape..
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Top level clusters — all wobbly and looking very ripe for picking.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
The darker color of the second level clusters provide weight to the branches.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Third level clusters.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Fourth level clusters.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
The fifth level clusters were so small that more levels would have been undiscernable. I decided to light this last level up with a bright green to stand out against the purple.
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
The final cover design with cover text and color treatment.
news + thoughts

Consequences of missing data

Fri 04-09-2026

Either I've been missing something or nothing has been going on. —Karen Elizabeth Gordon

Missing data are everywhere. Subjects may decline to participate in a survey or fail to answer sensitive questions. A cell culture might fail due to contamination. Instrument failures or mishandling of a sample may lead to missing observations. But why are missing data a problem?

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Nature Methods Points of Significance column: Consequences of missing data. (read)

This month, we begin a series of articles about practical and statistical aspects of missing data. We'll see that missing data can increase variability and introduce bias and we will ask whether anything can be done to mitigate these consequences. It turns out that, in the case where we know nothing about the missing subjects, no mitigation is possible. We must accept higher variability and, if we have a suspicion that the missing subjects aren’t completely random, possible bias as well.

Tanujit Dey, T., Lipsitz, S.R., Fitzmaurice, G., Krzywinski, M. & Altman, N. (2026) Points of significance: Consequences of missing data. Nat. Methods 23 (in print).

Double Robustness

Mon 04-05-2026

It is not certain that everything is uncertain. —Blaise Pascal

We have already explored how we can mitigate bias caused by confounding variables in observational studies using propensity score (PS) matching (PSM) and propensity score weighting (PSW). However, any statistical model is only as good as its assumptions and, if it is specified incorrectly, it can itself produce biased estimates of the treatment effect.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Nature Methods Points of Significance column: Double Robustness. (read)

This month, we explore double robustness, a powerful statistical concept that provides a valuable “safety net” against the risk of an incorrect model. It offers two opportunities, instead of just one, to obtain a valid estimate of the treatment effect — making it possible to draw credible causal inferences from observational data without having to depend on a single set of modeling assumptions.

Kurz, C.F., Krzywinski, M. & Altman, N. (2026) Points of significance: Double Robustness. Nat. Methods 23:868–869.

Nature Biotechnology cover

Thu 23-04-2026

My cover design on the 7 April 2026 Nature Biotechnology issue shows the dendrogram that represents a cluster of uniquely expressed (or downregulated) genes in human naive stem cells induced from such cells. Within each dendrogram block, the genomic barcode sequence (sampled from Supplementary Table 1) is depicted with a Code 39 barcode. The highlighted barcode is one of those used for cell isolation.

Ishiguro S. et al. A multi-kingdom genetic barcoding system for precise clone isolation (2026) Nature Biotechnology 44:616–629.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
My Nature Biotechnology phylogenetic tree cover (volume 44, issue 4, 7 April 2026). (more)

Browse my gallery of cover designs.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
A catalogue of my journal and magazine cover designs. (more)

Happy 2026 π Day—
Art for the 5%

Fri 13-03-2026

Celebrate π Day (March 14th) and enjoy the art — but only if you're part of the 5%.

Go ahead, see what you can't see.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
2026 π DAY | Art for the 5%. Shown in the style of Ishihara color test plates, the art is visible only to those with colour blindness. (details)

Ishihara's Tests for Colour Deficiency

Sun 08-03-2026

Authentic and accurate images of Ishihara's test plates photographed (and lovingly color-corrected) from the 38-plate Ishihara's Tests for Colour Deficiency.

I also provide the position, size, and color of each circle on each test plate.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
ISHIHARA'S TEST PLATE 6 | This plate is part of the set of transformation plates. If you see 5, you're ok. If you see 2, you're not. (details)
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
ISHIHARA'S TEST PLATE 18 | This plate is part of the set of mysterious hidden plates. If you don't see anything, you're ok. If you see 5, you're not. (details)
Martin Krzywinski | contact | Canada's Michael Smith Genome Sciences CentrePHSA
Google whack “vicissitudinal corporealization”