high-resolution, whole genome BAC arrays >> mouse >> rearray details
| mouse BAC array | |
|---|---|
| clones | 28,103 |
| libraries |
RPCI-23 RPCI-24 |
| resolution | 80 kb |
| redundancy | 2 x |
| availability | to be validated |
| contact | Martin Krzywinski |
| details | view | download | |
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Mouse BAC Array
Rearray details
The mouse rearray is constructed using 28,103 clones from RPCI-23, RPCI-24 BAC libraries. The set achieves an average depth of coverage of 2X, average effective resolution of 80 kb. Genome-adjacent clones in the set overlap by an average of 91 kb. The set provides coverage of 98.3% of the mouse mm5 (May 2004) genome assembly and 98.7% of the mouse Mar 2005 BAC fingerprint map. The clone set is not yet available. For details and timelines please contact Martin Krzywinski. The current version of the set is 1.
| BCGSC high resolution mouse BAC array | |
|---|---|
| clones | |
| total | 28,103 |
| localized | 28,073 |
| sequenced | 16,002 |
| with pair-end BES | 19,243 |
| size | 172 kb |
| libraries | |
| RPCI-23 | 19,284, 179 kb |
| RPCI-24 | 8,819, 159 kb |
| coverage | |
| sequence | 98.3%, 2.45 Gb, mm5 (May 2004) |
| fingerprint map | 98.7%, Mar 2005 |
| resolution | |
| resolution | 80 kb |
| depth | 2 X |
| clone overlap | 91 kb |
| construction | |
| sequence | mm3 (Feb 2003) |
| fp map | Jun 2003 |
| availability | |
| version | v 1 |
| status | to be validated |
| contact | Martin Krzywinski |