high-resolution, whole genome BAC arrays >> human >> rearray details
| human BAC array | |
|---|---|
| clones | 32,855 |
| libraries |
RPCI-11 RPCI-13 Caltech-D |
| resolution | 76 kb |
| redundancy | 1.8 x |
| availability | BACPAC Resources |
| contact | Pieter J. de Jong |
| details | view | download | |
UCSC Browser
Human BAC Array
Rearray details
The human rearray is constructed using 32,855 clones from RPCI-11, RPCI-13, Caltech-D BAC libraries. The set achieves an average depth of coverage of 1.8X, average effective resolution of 76 kb. Genome-adjacent clones in the set overlap by an average of 73 kb. The set provides coverage of 98% of the human hg17 (May 2004) genome assembly and 98% of the human May 2005 BAC fingerprint map. The clone set is publically available from BACPAC Resources. Please contact Pieter J. de Jong for details of how to obtain a copy of the set. The current version of the set is 1.1.
| BCGSC high resolution human BAC array | |
|---|---|
| clones | |
| total | 32,855 |
| localized | 32,206 |
| sequenced | 7,345 |
| with pair-end BES | 12,774 |
| size | 147 kb |
| libraries | |
| RPCI-11 | 30,061, 149 kb |
| RPCI-13 | 642, 136 kb |
| Caltech-D | 2,152, 122 kb |
| coverage | |
| sequence | 98%, 2.79 Gb, hg17 (May 2004) |
| fingerprint map | 98%, May 2005 |
| resolution | |
| resolution | 76 kb |
| depth | 1.8 X |
| clone overlap | 73 kb |
| construction | |
| sequence | hg11 (Apr 2002) |
| fp map | Nov 2001 |
| availability | |
| version | v 1.1 |
| source | BACPAC Resources |
| contact | Pieter J. de Jong |