Learning Circos
Bioinformatics and Genome Analysis
Fondazione Edmund Mach, San Michele all'Adige, Italy, 20 June 2019
v2.00 16 June 2019 Download PDF slides
v2.00 16 June 2019
A 1-day practical course in genomic data visualization with Circos. This material is part of the Bioinformatics and Genome Analysis course held at the Fondazione Edmund Mach in San Michele all'Adige, Italy. Materials also available here: course materials and PDF slides.
Quick links
MyPads | BCGA 2019 | 4-day Circos course | Circos documentation best practices getting started | Brewer palettes | Color resources | Nature Methods Points of View Points of Significance
Updates
I'll be posting corrections to any errors in the material and answers to your questions here, as they come up.
Errata
Answers to Your Questions
SVG output
To create an SVG file (in addition to PNG) use -svg,
> circos -svg
You can view the SVG file with Inkscape. You may want to install the CMU fonts (same as those used in Latex) that come with Circos (see etc/fonts/modern), which are the same fonts used in the PNG files.